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PCR |
Name: |
WP2.1 QuaL-Multiplex RealTime-PCR Myostatin |
Type: |
Real-Time PCR + Multiplex |
System: |
QuaLitative (Light Cycler; TaqMan; Matsunaga) |
Genetic Element: |
Myostatin |
Ampl.Length: |
99 |
GenomSize: |
|
AnnTemp: |
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Taxonomy: |
Animals |
PCR Description: |
WP 2.1: Development of multiplex-PCR for species in foods.
Qualitative multiplex real time PCR for pig, cattle and myostatin on the Light Cycler, Roche.
Target Element: Myostatin |
Temp. Time Program: |
PCR profile
Taq Activation 95 °C 600 sec
Cycles 38
Denat. Amplif. Extension
-------------------------------------------------
Target Temp. (°C) 95 64 72
Incubation time (sec) 5 5 4
Temp. Transition Rate (°C/sec) 20.0 20.0 20.0
Secondary target temp. (°C) 0 60 0
Step size (°C) 0.0 1.0 0
Step delay (Cycles) 0 10 0
Acquisition mode None Single None |
Device: |
Light Cycler, Roche |
Master Mix: |
|
nPrimers: |
|
Organisation: |
TIB |
Validation: |
|
Sequence: |
AB076403 |
Remarks: |
Detection of Cattle (66), and maybe also Pig (79)
Target Element: Myostatin |
Primers |
PPName |
Type |
PrimerSequence |
Length |
T_ann |
TmThermo |
Tm2AT |
%GC |
Position |
MY-r-long |
Antisense |
CCAAA TACCA gTgCC TgggT TCA |
23 |
72.1 |
63.4 |
70 |
52.2 |
2558-2580 |
MY-f_iFL |
Sense |
TTgTg CAAAT CCTgA gAC X T CAT |
22 |
63.8 |
55.5 |
62 |
40.9 |
2480-2501 |
LC-705_Myo |
Probe_Antisense |
ACCTT gTACC gTCTT TCATg ggTTT X |
25 |
70.8 |
62.3 |
72 |
44 |
2503-2527 |
Sequence |
NCBI-Acc: |
AB076403 |
Sequence Description: |
Bos taurus gene for myostatin, complete cds. |
BaseCount: |
2196 a 1116 c 1139 g 2209 t |
DNA-Sequence: |
AB076403.txt |
AminoAcid-Sequence: |
AB076403.txt |
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